{
  "_id": "6a3bbe7d5cdecea1d68306ef",
  "Package": "MJMbamlss",
  "Type": "Package",
  "Title": "Multivariate Joint Models with 'bamlss'",
  "Version": "0.1.0.9002",
  "Authors@R": "c(person(given = \"Nikolaus\", family = \"Umlauf\", role = c(\"aut\"), email = \"Nikolaus.Umlauf@uibk.ac.at\",\ncomment = c(ORCID = \"0000-0003-2160-9803\")),\nperson(\"Alexander\", \"Volkmann\", email = \"alexander.volkmann@hu-berlin.de\", role = c(\"aut\", \"cre\")))",
  "Description": "Multivariate joint models of longitudinal and\ntime-to-event data based on functional principal components\nimplemented with 'bamlss'. Implementation for Volkmann, Umlauf,\nGreven (2023) <arXiv:2311.06409>.",
  "License": "GPL-3",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "RoxygenNote": "7.2.3",
  "Config/testthat/edition": "3",
  "Config/pak/sysreqs": "cmake libfftw3-dev make libicu-dev libuv1-dev",
  "Repository": "https://alexvolkmann.r-universe.dev",
  "Date/Publication": "2025-03-08 15:09:39 UTC",
  "RemoteUrl": "https://github.com/alexvolkmann/mjmbamlss",
  "RemoteRef": "HEAD",
  "RemoteSha": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-06-24 11:18:23 UTC",
    "User": "root"
  },
  "Author": "Nikolaus Umlauf [aut] (ORCID: <https://orcid.org/0000-0003-2160-9803>),\nAlexander Volkmann [aut, cre]",
  "Maintainer": "Alexander Volkmann <alexander.volkmann@hu-berlin.de>",
  "MD5sum": "c374785b44116b7686edc5e9d39d94f3",
  "_user": "alexvolkmann",
  "_type": "src",
  "_file": "MJMbamlss_0.1.0.9002.tar.gz",
  "_fileid": "c4883a52ef0ba621d1e5e70404e4bfd5de71d19f9b5ee636aa8d0e44bcce9a70",
  "_filesize": 273236,
  "_sha256": "c4883a52ef0ba621d1e5e70404e4bfd5de71d19f9b5ee636aa8d0e44bcce9a70",
  "_created": "2026-06-24T11:18:23.000Z",
  "_published": "2026-06-24T11:24:45.051Z",
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 83181246982,
      "time": 233,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7848004141"
    },
    {
      "job": 83181246970,
      "time": 282,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7848019231"
    },
    {
      "job": 83181247021,
      "time": 228,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7848002728"
    },
    {
      "job": 83181246951,
      "time": 244,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7848006806"
    },
    {
      "job": 83181246967,
      "time": 131,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7847967789"
    },
    {
      "job": 83181246947,
      "time": 302,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7848026090"
    },
    {
      "job": 83181246930,
      "time": 180,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7847984566"
    },
    {
      "job": 83181246977,
      "time": 333,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7848037604"
    },
    {
      "job": 83180490801,
      "time": 256,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7847919983"
    },
    {
      "job": 83181246959,
      "time": 210,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7847994236"
    },
    {
      "job": 83181246882,
      "time": 171,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7847981826"
    },
    {
      "job": 83181246928,
      "time": 159,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7847977457"
    },
    {
      "job": 83181246865,
      "time": 226,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7848000408"
    }
  ],
  "_buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/28094495294",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/alexvolkmann/mjmbamlss",
  "_commit": {
    "id": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
    "author": "alexvolkmann <alexvolkmann@users.noreply.github.com>",
    "committer": "alexvolkmann <alexvolkmann@users.noreply.github.com>",
    "message": "Merge branch 'main' of github.com:alexvolkmann/MJMbamlss into main\n",
    "time": 1741446579
  },
  "_maintainer": {
    "name": "Alexander Volkmann",
    "email": "alexander.volkmann@hu-berlin.de",
    "login": "alexvolkmann",
    "description": "",
    "uuid": 45033439
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5",
      "role": "Depends"
    },
    {
      "package": "mgcv",
      "role": "Depends"
    },
    {
      "package": "bamlss",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "RcppEigen",
      "role": "LinkingTo"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "funData",
      "role": "Imports"
    },
    {
      "package": "statmod",
      "role": "Imports"
    },
    {
      "package": "mvtnorm",
      "role": "Imports"
    },
    {
      "package": "zoo",
      "role": "Imports"
    },
    {
      "package": "coda",
      "role": "Imports"
    },
    {
      "package": "gamm4",
      "role": "Imports"
    },
    {
      "package": "Matrix",
      "role": "Imports"
    },
    {
      "package": "refund",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "fdapace",
      "role": "Imports"
    },
    {
      "package": "sparseFLMM",
      "role": "Imports"
    },
    {
      "package": "MFPCA",
      "role": "Imports"
    },
    {
      "package": "foreach",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    },
    {
      "package": "splines",
      "role": "Suggests"
    },
    {
      "package": "tidyverse",
      "role": "Suggests"
    }
  ],
  "_owner": "alexvolkmann",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 2,
  "_contributors": [
    {
      "user": "alexvolkmann",
      "count": 23,
      "uuid": 45033439
    }
  ],
  "_userbio": {
    "uuid": 45033439,
    "type": "user",
    "name": "Alex Volkmann",
    "followers": 3
  },
  "_downloads": {
    "count": 200,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/MJMbamlss"
  },
  "_devurl": "https://github.com/alexvolkmann/mjmbamlss",
  "_searchresults": 15,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/MJMbamlss.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/alexvolkmann/mjmbamlss",
  "_realowner": "alexvolkmann",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2023-11-27"
    }
  ],
  "_exports": [
    "attach_wfpc",
    "MFPCA_cov",
    "mjm_bamlss",
    "preproc_MFPCA",
    "simMultiJM"
  ],
  "_datasets": [
    {
      "name": "pbc_subset",
      "title": "PBC Subset",
      "object": "pbc_subset",
      "class": [
        "data.frame"
      ],
      "fields": [
        "id",
        "survtime",
        "event",
        "sex",
        "drug",
        "age",
        "marker",
        "obstime",
        "y",
        "logy"
      ],
      "rows": 336,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "attach_wfpc",
      "title": "Attach Weighted Functional Principal Components to the Data",
      "topics": [
        "attach_wfpc"
      ]
    },
    {
      "page": "fpca",
      "title": "Functional principal components analysis by smoothed covariance",
      "topics": [
        "fpca"
      ]
    },
    {
      "page": "MFPCA_cov",
      "title": "Function to calculate the multivariate FPCA for a given covariance matrix and univariate basis functions",
      "topics": [
        "MFPCA_cov"
      ]
    },
    {
      "page": "mjm_bamlss",
      "title": "Family for Flexible Multivariate Joint Model",
      "topics": [
        "mjm_bamlss"
      ]
    },
    {
      "page": "MJM_predict",
      "title": "Prediction of MJM model",
      "topics": [
        "MJM_predict"
      ]
    },
    {
      "page": "pbc_subset",
      "title": "PBC Subset",
      "topics": [
        "pbc_subset"
      ]
    },
    {
      "page": "Predict.matrix.unc_pcre.random.effect",
      "title": "mgcv-style constructor for prediction of PC-basis functional random effects",
      "topics": [
        "Predict.matrix.unc_pcre.random.effect"
      ]
    },
    {
      "page": "preproc_MFPCA",
      "title": "Preprocessing step to create MFPCA object",
      "topics": [
        "preproc_MFPCA"
      ]
    },
    {
      "page": "sim_bamlss_predict",
      "title": "Simulation Helper Function - Predict the Results for bamlss-Models",
      "topics": [
        "sim_bamlss_predict"
      ]
    },
    {
      "page": "sim_jmb_predict",
      "title": "Simulation Helper Function - Predict the Results for JMbayes-Models",
      "topics": [
        "sim_jmb_predict"
      ]
    },
    {
      "page": "sim_jmbamlss_eval",
      "title": "Simulation Helper Function - Evaluate the Simulation for JMbamlss Setting",
      "topics": [
        "sim_jmbamlss_eval"
      ]
    },
    {
      "page": "sim_jmbayes_eval",
      "title": "Simulation Helper Function - Evaluate the Simulation for JMbayes Setting",
      "topics": [
        "sim_jmbayes_eval"
      ]
    },
    {
      "page": "simMultiJM",
      "title": "New Simulation Function For Multivariate JMs Based On FPCs",
      "topics": [
        "simMultiJM"
      ]
    },
    {
      "page": "smooth.construct.unc_pcre.smooth.spec",
      "title": "mgcv-style constructor for PC-basis functional random effects (no constraint)",
      "topics": [
        "smooth.construct.unc_pcre.smooth.spec"
      ]
    },
    {
      "page": "survint_C",
      "title": "Survival Integral",
      "topics": [
        "survint_C"
      ]
    },
    {
      "page": "varbinq",
      "title": "Flexible Joint Models for Multivariate Longitudinal and Time-to-Event Data",
      "topics": [
        "varbinq"
      ]
    }
  ],
  "_readme": "https://github.com/alexvolkmann/mjmbamlss/raw/HEAD/README.md",
  "_rundeps": [
    "abind",
    "ash",
    "backports",
    "bamlss",
    "base64enc",
    "BH",
    "bitops",
    "boot",
    "bslib",
    "cachem",
    "checkmate",
    "cli",
    "cluster",
    "coda",
    "codetools",
    "colorspace",
    "cpp11",
    "data.table",
    "deSolve",
    "digest",
    "distributions3",
    "dotCall64",
    "evaluate",
    "farver",
    "fastmap",
    "fda",
    "fdapace",
    "fds",
    "fields",
    "FNN",
    "fontawesome",
    "foreach",
    "foreign",
    "Formula",
    "fs",
    "funData",
    "gamm4",
    "ggplot2",
    "glue",
    "gridExtra",
    "grpreg",
    "gtable",
    "hdrcde",
    "highr",
    "Hmisc",
    "htmlTable",
    "htmltools",
    "htmlwidgets",
    "irlba",
    "isoband",
    "iterators",
    "jquerylib",
    "jsonlite",
    "kernlab",
    "KernSmooth",
    "knitr",
    "ks",
    "labeling",
    "lattice",
    "lifecycle",
    "lme4",
    "locfit",
    "magic",
    "magrittr",
    "maps",
    "MASS",
    "Matrix",
    "MBA",
    "mclust",
    "memoise",
    "MFPCA",
    "mgcv",
    "mime",
    "minqa",
    "multicool",
    "mvtnorm",
    "nlme",
    "nloptr",
    "nnet",
    "numDeriv",
    "pbs",
    "pcaPP",
    "plyr",
    "pracma",
    "R6",
    "rainbow",
    "rappdirs",
    "rbibutils",
    "RColorBrewer",
    "Rcpp",
    "RcppEigen",
    "RCurl",
    "Rdpack",
    "reformulas",
    "refund",
    "rlang",
    "RLRsim",
    "rmarkdown",
    "rpart",
    "rstudioapi",
    "S7",
    "sass",
    "scales",
    "sp",
    "spam",
    "sparseFLMM",
    "statmod",
    "stringi",
    "stringr",
    "survival",
    "tinytex",
    "vctrs",
    "viridisLite",
    "withr",
    "xfun",
    "yaml",
    "zoo"
  ],
  "_score": 3.1760912590556813,
  "_indexed": true,
  "_nocasepkg": "mjmbamlss",
  "_universes": [
    "alexvolkmann"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0.9002",
      "date": "2026-06-24T11:21:50.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "26f71b17c5546a803cd85dcf1b6439180e0231c6af6e1efa35380da4cc2d9fef",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/28094495294"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0.9002",
      "date": "2026-06-24T11:22:20.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "d3d1d987894d96c6b1397f481f09bb551fbaa9f971e6abb791bbf7fcb59b330e",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/28094495294"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.0.9002",
      "date": "2026-06-24T11:21:43.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "746c2ce6bd3a122a559dc82e30c55869b923bcce89cb5e5f79251ba7c5c5b822",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/28094495294"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.0.9002",
      "date": "2026-06-24T11:21:41.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "30fa33cf9f2fe66b25b2fa625c177c2cc4ae150689be8e2599db3bdf4f2f02eb",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/28094495294"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.0.9002",
      "date": "2026-06-24T11:20:20.000Z",
      "arch": "aarch64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "c74deb5b1bae0290f2a05cc688b180dcaa67e9a3145e2c5480b5152b5d7e523c",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/28094495294"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.0.9002",
      "date": "2026-06-24T11:22:13.000Z",
      "arch": "x86_64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "b88db5ac546681c7f570dd0411d996e94aba02d30407c560b8d73319f4581217",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/28094495294"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.0.9002",
      "date": "2026-06-24T11:20:40.000Z",
      "arch": "aarch64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "d81f70d8161dc0b6063f3cf73eee639215a4cc074751b21097d98d585a3acb8f",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/28094495294"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.0.9002",
      "date": "2026-06-24T11:22:06.000Z",
      "arch": "x86_64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "84c01079877cb8cfb3eb30612127a9a06268b55ac9ccb9ae6c4178ddefdb4e40",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/28094495294"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.0.9002",
      "date": "2026-06-24T11:22:18.000Z",
      "arch": "emscripten",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "7f4bf2d735df6fc71202dc2f661a560395759db0785f9062d4894e2826da5495",
      "status": "success",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/28094495294"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.0.9002",
      "date": "2026-06-24T11:20:19.000Z",
      "arch": "x86_64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "6d48142dfc395e29aabb10db6a05902a57b4a1815adefd7d1c202981e0ba3ade",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/28094495294"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.0.9002",
      "date": "2026-06-24T11:20:05.000Z",
      "arch": "x86_64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "4b6841aba014fb4ed75e608fdaccc43d15d6abe3bb60e1d64091d0143879825b",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/28094495294"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.0.9002",
      "date": "2026-06-24T11:20:50.000Z",
      "arch": "x86_64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "c70867dc37f6bd34078a4a27cf240b8648ce53a61cba6f45c0182c6b849d2017",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/28094495294"
    }
  ]
}