{
  "_id": "6ad1fcbd1200a49930211d30",
  "Package": "MJMbamlss",
  "Type": "Package",
  "Title": "Multivariate Joint Models with 'bamlss'",
  "Version": "0.1.0.9002",
  "Authors@R": "c(person(given = \"Nikolaus\", family = \"Umlauf\", role = c(\"aut\"), email = \"Nikolaus.Umlauf@uibk.ac.at\",\ncomment = c(ORCID = \"0000-0003-2160-9803\")),\nperson(\"Alexander\", \"Volkmann\", email = \"alexander.volkmann@hu-berlin.de\", role = c(\"aut\", \"cre\")))",
  "Description": "Multivariate joint models of longitudinal and\ntime-to-event data based on functional principal components\nimplemented with 'bamlss'. Implementation for Volkmann, Umlauf,\nGreven (2023) <arXiv:2311.06409>.",
  "License": "GPL-3",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "RoxygenNote": "7.2.3",
  "Config/testthat/edition": "3",
  "Config/pak/sysreqs": "cmake libfftw3-dev make libicu-dev libuv1-dev",
  "Repository": "https://alexvolkmann.r-universe.dev",
  "Date/Publication": "2025-03-08 15:09:39 UTC",
  "RemoteUrl": "https://github.com/alexvolkmann/mjmbamlss",
  "RemoteRef": "HEAD",
  "RemoteSha": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-10-16 10:20:18 UTC",
    "User": "root"
  },
  "Author": "Nikolaus Umlauf [aut] (ORCID: <https://orcid.org/0000-0003-2160-9803>),\nAlexander Volkmann [aut, cre]",
  "Maintainer": "Alexander Volkmann <alexander.volkmann@hu-berlin.de>",
  "_user": "alexvolkmann",
  "_type": "src",
  "_file": "MJMbamlss_0.1.0.9002.tar.gz",
  "_fileid": "https://r2.ropensci.org/bf4a6189906b3c3a0faf97c65e8f8f1b1d23fc5ec8faec7256c50a0e9137b35c",
  "_filesize": 271373,
  "_sha256": "bf4a6189906b3c3a0faf97c65e8f8f1b1d23fc5ec8faec7256c50a0e9137b35c",
  "_expires": "2027-01-24T10:30:19.000Z",
  "_created": "2026-10-16T10:20:18.000Z",
  "_published": "2026-10-16T10:30:21.589Z",
  "_buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/38886051778",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_jobs": [
    {
      "job": 116925782024,
      "time": 232,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "12040026570"
    },
    {
      "job": 116925781967,
      "time": 228,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "12040555162"
    },
    {
      "job": 116925782048,
      "time": 227,
      "config": "linux-release-arm64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "12040315582"
    },
    {
      "job": 116925782008,
      "time": 322,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "12039827562"
    },
    {
      "job": 116925782023,
      "time": 167,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "12040530106"
    },
    {
      "job": 116925781930,
      "time": 401,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "12040855466"
    },
    {
      "job": 116925781977,
      "time": 208,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "12039739361"
    },
    {
      "job": 116925782143,
      "time": 544,
      "config": "macos-release-x86_64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "12040635882"
    },
    {
      "job": 116924055097,
      "time": 281,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12039524397"
    },
    {
      "job": 116925781849,
      "time": 150,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "12039871904"
    },
    {
      "job": 116925782026,
      "time": 422,
      "config": "windows-devel-arm64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "12040675415"
    },
    {
      "job": 116925782192,
      "time": 201,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "12040006421"
    },
    {
      "job": 116925782074,
      "time": 194,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "12040240595"
    },
    {
      "job": 116925782089,
      "time": 427,
      "config": "windows-release-arm64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "12040765271"
    },
    {
      "job": 116925782134,
      "time": 168,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "12040315426"
    }
  ],
  "_upstream": "https://github.com/alexvolkmann/mjmbamlss",
  "_commit": {
    "id": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
    "author": "alexvolkmann <alexvolkmann@users.noreply.github.com>",
    "committer": "alexvolkmann <alexvolkmann@users.noreply.github.com>",
    "message": "Merge branch 'main' of github.com:alexvolkmann/MJMbamlss into main\n",
    "time": 1741446579
  },
  "_maintainer": {
    "name": "Alexander Volkmann",
    "email": "alexander.volkmann@hu-berlin.de",
    "login": "alexvolkmann",
    "description": "",
    "uuid": 45033439
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5",
      "role": "Depends"
    },
    {
      "package": "mgcv",
      "role": "Depends"
    },
    {
      "package": "bamlss",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "RcppEigen",
      "role": "LinkingTo"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "funData",
      "role": "Imports"
    },
    {
      "package": "statmod",
      "role": "Imports"
    },
    {
      "package": "mvtnorm",
      "role": "Imports"
    },
    {
      "package": "zoo",
      "role": "Imports"
    },
    {
      "package": "coda",
      "role": "Imports"
    },
    {
      "package": "gamm4",
      "role": "Imports"
    },
    {
      "package": "Matrix",
      "role": "Imports"
    },
    {
      "package": "refund",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "fdapace",
      "role": "Imports"
    },
    {
      "package": "sparseFLMM",
      "role": "Imports"
    },
    {
      "package": "MFPCA",
      "role": "Imports"
    },
    {
      "package": "foreach",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    },
    {
      "package": "splines",
      "role": "Suggests"
    },
    {
      "package": "tidyverse",
      "role": "Suggests"
    }
  ],
  "_owner": "alexvolkmann",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 2,
  "_contributors": [
    {
      "user": "alexvolkmann",
      "count": 23,
      "uuid": 45033439
    }
  ],
  "_userbio": {
    "uuid": 45033439,
    "type": "user",
    "name": "Alex Volkmann",
    "followers": 3
  },
  "_downloads": {
    "count": 255,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/MJMbamlss"
  },
  "_devurl": "https://github.com/alexvolkmann/mjmbamlss",
  "_searchresults": 15,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/MJMbamlss.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md"
  ],
  "_homeurl": "https://github.com/alexvolkmann/mjmbamlss",
  "_realowner": "alexvolkmann",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2023-11-27"
    }
  ],
  "_exports": [
    "attach_wfpc",
    "MFPCA_cov",
    "mjm_bamlss",
    "preproc_MFPCA",
    "simMultiJM"
  ],
  "_datasets": [
    {
      "name": "pbc_subset",
      "title": "PBC Subset",
      "object": "pbc_subset",
      "class": [
        "data.frame"
      ],
      "fields": [
        "id",
        "survtime",
        "event",
        "sex",
        "drug",
        "age",
        "marker",
        "obstime",
        "y",
        "logy"
      ],
      "rows": 336,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "attach_wfpc",
      "title": "Attach Weighted Functional Principal Components to the Data",
      "topics": [
        "attach_wfpc"
      ]
    },
    {
      "page": "fpca",
      "title": "Functional principal components analysis by smoothed covariance",
      "topics": [
        "fpca"
      ]
    },
    {
      "page": "MFPCA_cov",
      "title": "Function to calculate the multivariate FPCA for a given covariance matrix and univariate basis functions",
      "topics": [
        "MFPCA_cov"
      ]
    },
    {
      "page": "mjm_bamlss",
      "title": "Family for Flexible Multivariate Joint Model",
      "topics": [
        "mjm_bamlss"
      ]
    },
    {
      "page": "MJM_predict",
      "title": "Prediction of MJM model",
      "topics": [
        "MJM_predict"
      ]
    },
    {
      "page": "pbc_subset",
      "title": "PBC Subset",
      "topics": [
        "pbc_subset"
      ]
    },
    {
      "page": "Predict.matrix.unc_pcre.random.effect",
      "title": "mgcv-style constructor for prediction of PC-basis functional random effects",
      "topics": [
        "Predict.matrix.unc_pcre.random.effect"
      ]
    },
    {
      "page": "preproc_MFPCA",
      "title": "Preprocessing step to create MFPCA object",
      "topics": [
        "preproc_MFPCA"
      ]
    },
    {
      "page": "sim_bamlss_predict",
      "title": "Simulation Helper Function - Predict the Results for bamlss-Models",
      "topics": [
        "sim_bamlss_predict"
      ]
    },
    {
      "page": "sim_jmb_predict",
      "title": "Simulation Helper Function - Predict the Results for JMbayes-Models",
      "topics": [
        "sim_jmb_predict"
      ]
    },
    {
      "page": "sim_jmbamlss_eval",
      "title": "Simulation Helper Function - Evaluate the Simulation for JMbamlss Setting",
      "topics": [
        "sim_jmbamlss_eval"
      ]
    },
    {
      "page": "sim_jmbayes_eval",
      "title": "Simulation Helper Function - Evaluate the Simulation for JMbayes Setting",
      "topics": [
        "sim_jmbayes_eval"
      ]
    },
    {
      "page": "simMultiJM",
      "title": "New Simulation Function For Multivariate JMs Based On FPCs",
      "topics": [
        "simMultiJM"
      ]
    },
    {
      "page": "smooth.construct.unc_pcre.smooth.spec",
      "title": "mgcv-style constructor for PC-basis functional random effects (no constraint)",
      "topics": [
        "smooth.construct.unc_pcre.smooth.spec"
      ]
    },
    {
      "page": "survint_C",
      "title": "Survival Integral",
      "topics": [
        "survint_C"
      ]
    },
    {
      "page": "varbinq",
      "title": "Flexible Joint Models for Multivariate Longitudinal and Time-to-Event Data",
      "topics": [
        "varbinq"
      ]
    }
  ],
  "_readme": "https://github.com/alexvolkmann/mjmbamlss/raw/HEAD/README.md",
  "_rundeps": [
    "abind",
    "ash",
    "backports",
    "bamlss",
    "base64enc",
    "BH",
    "bitops",
    "boot",
    "bslib",
    "cachem",
    "checkmate",
    "cli",
    "cluster",
    "coda",
    "codetools",
    "colorspace",
    "cpp11",
    "data.table",
    "deSolve",
    "digest",
    "distributions3",
    "dotCall64",
    "evaluate",
    "farver",
    "fastmap",
    "fda",
    "fdapace",
    "fds",
    "fields",
    "FNN",
    "fontawesome",
    "foreach",
    "foreign",
    "Formula",
    "fs",
    "funData",
    "gamm4",
    "ggplot2",
    "glue",
    "gridExtra",
    "grpreg",
    "gtable",
    "hdrcde",
    "highr",
    "Hmisc",
    "htmlTable",
    "htmltools",
    "htmlwidgets",
    "irlba",
    "isoband",
    "iterators",
    "jquerylib",
    "jsonlite",
    "kernlab",
    "KernSmooth",
    "knitr",
    "ks",
    "labeling",
    "lattice",
    "lifecycle",
    "lme4",
    "locfit",
    "magic",
    "magrittr",
    "maps",
    "MASS",
    "Matrix",
    "MBA",
    "mclust",
    "memoise",
    "MFPCA",
    "mgcv",
    "mime",
    "minqa",
    "multicool",
    "mvtnorm",
    "nlme",
    "nloptr",
    "nnet",
    "numDeriv",
    "pbs",
    "pcaPP",
    "plyr",
    "pracma",
    "R6",
    "rainbow",
    "rappdirs",
    "rbibutils",
    "RColorBrewer",
    "Rcpp",
    "RcppEigen",
    "RCurl",
    "Rdpack",
    "reformulas",
    "refund",
    "rlang",
    "RLRsim",
    "rmarkdown",
    "rpart",
    "rstudioapi",
    "S7",
    "sass",
    "scales",
    "sp",
    "spam",
    "sparseFLMM",
    "statmod",
    "stringi",
    "stringr",
    "survival",
    "tinytex",
    "vctrs",
    "viridisLite",
    "withr",
    "xfun",
    "yaml",
    "zoo"
  ],
  "_score": 3.1760912590556813,
  "_indexed": true,
  "_nocasepkg": "mjmbamlss",
  "_universes": [
    "alexvolkmann"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0.9002",
      "date": "2026-10-16T10:23:39.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "https://r2.ropensci.org/16cd820ecf48a79d5aa18f2c7f593cba67c09fcba275769bbc58511f89f2ea47",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/38886051778"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0.9002",
      "date": "2026-10-16T10:23:15.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "https://r2.ropensci.org/cac01e403b2973f3780d850de04c3b9d02b458cbe80f036887dfaa9bc0d6cc0c",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/38886051778"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.1.0.9002",
      "date": "2026-10-16T10:23:36.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "https://r2.ropensci.org/6cf9d37a30ad68e9ea251d41e56d72e35986eb9a740f45f3c6ec34d92f3f8ecb",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/38886051778"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.1.0.9002",
      "date": "2026-10-16T10:25:19.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "https://r2.ropensci.org/c89050bc11ead5d8e87383e50f75db871f037ec308c5d32a877fc3b2f6292d8a",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/38886051778"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.0.9002",
      "date": "2026-10-16T10:22:27.000Z",
      "arch": "aarch64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "https://r2.ropensci.org/60f8183206e9bba2e05d5380b7705e3841684a6c4d6076fd3ee94487cbe66e79",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/38886051778"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.0.9002",
      "date": "2026-10-16T10:24:47.000Z",
      "arch": "x86_64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "https://r2.ropensci.org/e5ab4ae2796325f064fe054b72b0ee2bf477bf04ae577411d143643198b34afc",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/38886051778"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.1.0.9002",
      "date": "2026-10-16T10:22:50.000Z",
      "arch": "aarch64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "https://r2.ropensci.org/4c681ad1b4ad2620a116268bae21cb50924f8d7b855ba945848c911c07981193",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/38886051778"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.1.0.9002",
      "date": "2026-10-16T10:26:14.000Z",
      "arch": "x86_64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "https://r2.ropensci.org/2e4e97b9a13882135ea0fc8bc3179ecc96b3e543d713e378dc8dd6c789e87078",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/38886051778"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.0.9002",
      "date": "2026-10-16T10:23:12.000Z",
      "arch": "emscripten",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "https://r2.ropensci.org/d4a55b11be5a67ed81debf9a60e12850fe27aaa11d382dfcb458de60f0b50b03",
      "status": "success",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/38886051778"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.0.9002",
      "date": "2026-10-16T10:26:02.000Z",
      "arch": "aarch64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "https://r2.ropensci.org/530620df2f2c00037ee82eca9a1f17585f1fbd96c0b13249777325205c76c7d6",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/38886051778"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.0.9002",
      "date": "2026-10-16T10:22:14.000Z",
      "arch": "x86_64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "https://r2.ropensci.org/56a6068925f80c085c2b134e8a495f0c9b8f494bd8c775f7b26762b9725378c6",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/38886051778"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.0.9002",
      "date": "2026-10-16T10:22:29.000Z",
      "arch": "x86_64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "https://r2.ropensci.org/04b0cd2ab3438d7bec10d465efeffb941a98a15407e88857fb3b73bcab9fe206",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/38886051778"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.1.0.9002",
      "date": "2026-10-16T10:25:56.000Z",
      "arch": "aarch64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "https://r2.ropensci.org/743e00e9aafe14244bab252f61622a62cee63351dfdfe5860ce8267932be2b49",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/38886051778"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.1.0.9002",
      "date": "2026-10-16T10:22:04.000Z",
      "arch": "x86_64",
      "commit": "bc486b98e9550a4bbd842c70bb0f8521d0203b96",
      "fileid": "https://r2.ropensci.org/697b20d83ecd1e9025c89d4f1feeb89af37ce362d36813a661b90a9f6037a720",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/alexvolkmann/actions/runs/38886051778"
    }
  ]
}